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Mystery Animal

I’ve been slogging through some field data today, when this mysterious critter crawled across my screen. These are the only shots we got – check out those zebra-stripey tube socks in the first image and the strange feathery texture. Who here knows what we snapped a pic of?

IMAG3392 IMAG3393 IMAG3394

Everybody dance now!

Formerly titled: I love the Zooniverse, and all its ridiculousness.

Some of you might be familiar with the silly manoeuvres we undertake to trigger the camera traps in the field. The sensors on the cameras are best at capturing movement side-to-side, hence ridiculousness such as this:

flcd4

The Stan Dance

and this…

flcgb

Craig surprising the camera

and this.

“The Ali Dance”

Well, fellow Zoo-ites Rob and Grant have now generously attempted their own version of this last one. Check it out on the Zooniverse Advent Calendar here!! And, if you’re feeling especially brave, send in your own recreation to team@zooniverse.org!

Caught in the act

I am sure you were all enthralled by the recent shots of a male lion with a hyena clamped in his jaw. A truly awesome capture. The reality is that action shots like that are few and far between. Snapshot Serengeti has had only a handful in the millions of images that have been classified to date.

So when Karen and Deon Scheepers caught the following action on camera trap on the nature reserve in South Africa where I used to live I just had to share it with you;

Wildebeest

Wildebeest

 

uh oh.. look behind you!

 

leopard on the hunt

 

 

What a capture… a leopard on the hunt. The out come was unknown, reserve staff looked for a carcass but didn’t find anything. To think I used to walk those trails every day, I wonder how many times a leopard walked out behind me!

Thanks Karen and Deon Scheepers for sharing these shots.

Africa on my door step

So those of you who have read my blogs are probably used to hearing me bemoaning the fact that I am no longer in Africa but am back in France whilst I am studying towards a degree. I can’t really complain, life is still good, but the European wildlife feels a bit lacking when you have been used to the mega fauna of Africa.
I have however continued to put out my camera traps in order to survey my property and the surrounding countryside and it’s busier than you would think. Badgers, foxes, hares, otters, roe deer, squirrels, stone martens and wild boar make regular contact with my paltry two cameras. Not really enough camera power to base a study on but interesting all the same.
The highlight has been the discovery that one little favourite of mine from Africa has followed me to France; the genet. Yes the common genet (Genetta genetta) lives in France and I am ecstatic to say right by my house too.
It seems no-one really knows how they got here but it was probably something to do with the Romans centuries ago being brought over from the Magreb region of North Africa. They are now naturalised animals in Spain, Portugal and France. Refreshingly for an introduced animal they are not invasive and have little impact if any on the native wildlife, so I can go on loving them with a clear conscience.
Here are a couple of shots of genets in France for your enjoyment!

 

Common genetCommon genetCommon genet

More on the Melanistic Serval

As Meredith posted the other day, one of our camera traps caught a melanistic serval. Melanism is known across a broad variety of animals, but is particularly prevalent in the cat family. Of 37 known species of cat, at least 13 species have melanistic individuals: the domestic cat, the jungle cat, the leopard, the jaguar, the bobcat, Geoffroy’s cat, the kodkod, the oncilla, the colocolo, the jaguarundi, the Asian golden cat, the marbled cat, and the serval.

Why some individuals are melanistic and why cats are particularly prone to melanism is still a bit of a mystery. It is generally thought that melanism is maladaptive – that is, that individuals with melanism are at a disadvantage because they stand out more than normally colored individuals and so are more likely to be targets of predators and competitors. The consequence is that in populations with a lot of melanism, there ought to be some sort of advantage to offset the disadvantage.

Melanistic serval

One possible explanation for melanism is that cats’ black fur helped keep them warm at higher elevations by absorbing more sunlight. This idea came from the fact that many cat populations with high rates of melanism are found at higher elevations. More recently, there have been studies suggesting that melanistic individuals are more resistant to disease.

There’s not a lot of literature on melanistic servals. But I did find an article in the Journal of East African Natural History that listed the known locations of melanistic serval populations in East Africa. Interestingly, the four main populations with melanism are all highland locations: Mt. Kenya and the nearby Aberdare highlands in Kenya and Mt. Kilimanjaro and North Pare Mountains in Tanzania. All of these are in the general geographic region of Serengeti National Park, so it’s perhaps not too surprising that melanistic servals are there too. What is unusual is that the Serengeti is not a highland.

MelanisticServalOur long-term Serengeti experts, with their decades of experience in the Serengeti, are surprised by the melanistic serval snapped by our cameras. David Bygott says that he’s never heard of a melanistic serval in the Serengeti, and Craig Packer says that while he’s seen melanistic individuals of other animals up on the rim of Ngorongoro Crater (a highland), he’s never seen a melanistic serval anywhere. So this Snapshot Serengeti image is likely the only documented evidence of melanistic serval in the Serengeti.

More results!

As I’m writing up my dissertation (ahh!), I’ve been geeking out with graphs and statistics (and the beloved/hated stats program R). I thought I’d share a cool little tidbit.

Full disclosure: this is just a bit of an expansion on something I posted back in March about how well the camera traps reflect known densities. Basically, as camera traps become more popular, researchers are increasingly looking for simple analytical techniques that can allow them to rapidly process data. Using the raw number of photographs or animals counted is pretty straightforward, but is risky because not all animals are equally “detectable”: some animals behave in ways that make them more likely to be seen than other animals. There are a lot of more complex methods out there to deal with these detectability issues, and they work really well — but they are really complex and take a long time to work out. So there’s a fair amount of ongoing debate about whether or not raw capture rates should ever be used even for quick and dirty rapid assessments of an area.

Since the Serengeti has a lot of other long term monitoring, we were able to compare camera trap capture rates (# of photographs weighted by group size) to actual population sizes for 17 different herbivores. Now, it’s not perfect — the “known” population sizes reflect herbivore numbers in the whole park, and we only cover a small fraction of the park. But from the graph below, you’ll see we did pretty well.

HerbComparisons

Actual herbivore densities (as estimated from long-term monitoring) are given on the x-axis, and the # photographic captures from our camera survey are on the y-axis. Each species is in a different color (migratory animals are in gray-scale). Some of the species had multiple population estimates produced from different monitoring projects — those are represented by all the smaller dots, and connected by a line for each species. We took the average population estimate for each species (bigger dots).

We see a very strong positive relationship between our photos and actual population sizes: we get more photos for species that are more abundant. Which is good! Really good! The dashed line shows the relationship between our capture rates and actual densities for all species. We wanted to make sure, however, that this relationship wasn’t totally dependent on the huge influx of wildebeest and zebra and gazelle — so we ran the same analysis without them. The black line shows that relationship. It’s still there, it’s still strong, and it’s still statistically significant.

Now, the relationship isn’t perfect. Some species fall above the line, and some below the line. For example, reedbuck and topi fall below the line – meaning that given how many topi really live in Serengeti, we should have gotten more pictures. This might be because topi mostly live in the northern and western parts of Serengeti, so we’re just capturing the edge of their range. And reedbuck? This might be a detectability issue — they tend to hide in thickets and so might not pass in front of cameras as often as animals that wander a little more actively.

Ultimately, however, we see that the cameras do a good overall job of catching more photos of more abundant species. Even though it’s not perfect, it seems that raw capture rates give us a pretty good quick look at a system.

Giraffe battle

I thought I would share these video clips from my camera trap with you. During my research using camera traps in South Africa I mostly used the picture mode but in the early days when I was trying to figure out what the camera trap was capable of and what was most valuable from my research point of view I messed around with the video option.
From my research perspective it wasn’t that great, I found that the camera was slower to trigger in video mode and so particularly at night I was left with lots of footage of nothing. But from pure interest value it sometimes proved very interesting.
On this occasion I had set up the camera on a sand road hoping to capture the leopard who frequently passed that way leaving its pug marks for all to see. I was pretty sure of capturing the leopard. What I didn’t bank on was getting a full 17 minutes of footage of two giraffe battling it out. Nor was I expecting the unique perspective from which the camera shot the footage. Oh and the leopard never showed. Typical!

I hope you enjoy the following three short clips.


Fieldwork on the horizon

In news not quite as exciting as Ali’s (congratulations again!), I have just gotten word from the Tanzanian research institute that the proposal I submitted for summer research have been approved! It looks like I’ll be heading out to Dar es Salaam and Arusha in the next  three weeks to get the rest of my permits sorted out, and then head into the field immediately afterward. Definitely looking forward to seeing this amazing system first-hand — I’m sure it will be a surreal experience, after becoming so familiar with the animals and landscape through the camera trap images. Added bonus: I get to leave Minnesota, where it is still snowing. Hurrah!

South Africa, here I come.

Back in October, I wrote about how a grant proposal was turning me into a zombie.

Well, much to my surprise, turns out that my foray into the world of the walking dead was worth the effort. I’ve just heard that the National Science Foundation does, indeed, want to send me to South Africa to carry out this research!

Basically, I’m interested in how the other big carnivores (hyenas, leopards, cheetahs, and wild dogs) manage to live with lions. And I think that one of the keys to their coexistence has to do with how the other carnivores distribute themselves across the landscape to avoid being killed or harassed by lions. Do they avoid huge tracts of land and lose access to the valuable resources within? Or are they able to fine-tune their behavior and still use those areas without getting into trouble?

As you know, I’m using the camera traps to try and figure out these patterns of habitat use by the major carnivores. But that still just tells me what they do in a place (the Serengeti) where there are lions, and I don’t know if the lions are directly causing these patterns. I can’t, for obvious reasons, do an experiment where I take out all the lions and see if the rest of the animals change their behaviors, which would help me identify such a causal relationship.

But in South Africa, there are two virtually identical reserves — they have the same habitat, the same prey animals, and the same carnivores…except that one has lions and one does not. These reserves are right next to each other and surrounded by fencing. So they are pretty much the perfect experimental system where I can actually answer whether or not the patterns we see in predator behavior are caused by lions. What’s even better is that there are already ongoing research projects there that are running camera trap surveys very similar to Snapshot Serengeti. So most of my work will be doing some measurements of the vegetation and working with the researchers in South Africa to compile their data in a way that we can draw these comparisons.

Comparison of Serengeti (left) and Phinda/Mkhuze (right).

Comparison of Serengeti (left) and Phinda/Mkhuze (right). Phinda and Mkhuze are two virtually identical reserves in South Africa, except that lions have historically been excluded from Mkhuze.

It’s going to be a *lot* of computer work with a *little* bit of getting out into the bush, but the questions are so cool and the ability to effectively isolate the effect of a single top predator (lions) in a natural ecosystem is so rare, that I couldn’t be more excited about it.

Interesting finds from Season 7!

Season 7 is up and running, and we’re already running into some interesting critters!

melanistic serval

No, that’s not a house cat wandering through the middle of the savanna. If you check out the gigantic ears, it appears that we’ve caught sight of a melanistic serval! Melanism involves a genetic mutation that causes the development of dark pigments in the skin, like a reverse albinism. For comparison, these guys normally look like this:

regular ol’ serval

According to our field assistant, Daniel, the serval population is booming in the Serengeti at the moment. Perhaps with so many animals, it’s not entirely unexpected to find one or two odd cases like this.

Let’s see what other interesting finds pop up in the latest season of Snapshot Serengeti!

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